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Workflows management: new abilities for the biological information overflow

5-7 October, 2005, Second University of Naples, Naples, Italy

List of posters

 
P2 Annotation of cell lines by using workflows: a first experience
Domenico Marra, Barbara Parodi, M. Assunta Manniello and Paolo Romano
National Cancer Research Center, Genoa, Italy
Abstract in PDF format [172 KB] - Poster in png format [396 KB] -
 
P3 A set of simple workflows simplifying access to TP53 mutation database
Domenico Marra and Paolo Romano
Bioinformatics and Structural Proteomics, National Cancer Research Center, Genoa, Italy
Abstract in PDF format [80 KB] - Poster in png format [1,536 KB] -
 
P4 Discovery of conserved translational regulatory signals with the GeneHuggers bioinformatics application development framework
Jason S. Iacovoni and Herve Prats,
Louis Bugnard Institute, INSERM, Toulouse, France
Abstract in PDF format [80 KB] - Poster in PDF format [2,576 KB]
 
P5 A Functional-Genomics Information Management System
A.P. Meintjes, C.A. Schriek, C.A. Hefer, T.A.P. de Beer, P.B. Burger, A.J. Oelofse and F. Joubert
Bioinformatics and Computational Biology Unit, University of Pretoria, Pretoria, South Africa
Abstract in PDF format [60 KB] - Poster in PDF format [44 KB]
 
P6 LIMSTILL platform: managing resequencing and TILLING projects in model organisms,
V. Guryev, E. Berezikov, R.H.A. Plasterk, E. Cuppen
Hubrecht Laboratory, Utrecht, The Netherlands
Abstract in PDF format [76 KB] - Poster in PDF format [608 KB]
 
P7 Mobyle: a Web portal framework for bioinformatics analyses
B. Néron, P. Tufféry, C. Letondal
Institut Pasteur, Paris, France and Equipe de Bioinformatique Génomique et Moléculaire (EBGM), INSERM E346, Université Paris 7, Paris, France
Abstract in PDF format
 
P8 Work-Flow Management Systems for Bioinformatics Applications: a Novel Generation based on Standard Structure, Engine, Components and Platforms
F. Gianfelici,
Dip. Elettronica, Intelligenza Artificiale e Telecomunicazioni, Università Politecnica delle Marche, Ancona, Italy
 
P9 A Unified Language of Workflow Management Systems for Bioinformatics Applications
F. Gianfelici,
Dip. Elettronica, Intelligenza Artificiale e Telecomunicazioni, Università Politecnica delle Marche, Ancona, Italy
 
P10 Interactive-Systems: Two Technological Scenarios based on a Functional Characterization of Workflows Management System in terms of Active/Passive Components for Bioinformatics-Applications
F. Gianfelici,
Dip. Elettronica, Intelligenza Artificiale e Telecomunicazioni, Università Politecnica delle Marche, Ancona, Italy
 
P11 A New Kind of 'Versioning' Systems for Workflows: The Future of Reusability and Traceability in Bioinformatics
F. Gianfelici,
Dip. Elettronica, Intelligenza Artificiale e Telecomunicazioni, Università Politecnica delle Marche, Ancona, Italy
 
P12 Modelling of Distributed Workflow Management Systems (WFMSs) with an Approach based on Peer-to-Peer (P2P) Network: A New Vision, and its Technological Implications
F. Gianfelici,
Dip. Elettronica, Intelligenza Artificiale e Telecomunicazioni, Università Politecnica delle Marche, Ancona, Italy
 
P13 Web Services for Sequence Analysis at DKFZ
P. Ernst and S. Suhai,
Molecular Biophysics, German Cancer Research Center (DKFZ), Heidelberg, Germany
Abstract in PDF format [88 KB] -
 
P14 Making use of the GRID for Microarray Data Analysis
R. Allan2, D. Grose3, M. Hayes1, J. Kewley2, L. Morris1,
1Cambridge e-Science Centre, University of Cambridge, Cambridge, UK
2e-Science Centre, CCLRC Daresbury Laboratory, Daresbury, UK
3Centre for e-Science, University of Lancaster, UK
Abstract in PDF format [32 KB] - Poster in PDF format [224 KB]
 
P15 An Agent Approach to High Level Workflow Management in Functional Genomics
G. Armano1, L. Milanesi2, A. Orro1,2 and E. Vargiu1,
1DIEE, University of Cagliari, Cagliari, Italy,
2Biomedical Technologies Institute, National Research Council, Milano, Italy
Abstract in PDF format [24 KB] - Poster in PDF format [56 KB]
 
P16 Genome Annotation Pipeline
A. Lanzén1, S. Helge Grindhaug1, T. Oinn2, and P. Puntervoll1,
1Bergen Center for Computational Science, Bergen, Norway
2European Bioinformatics Institute, EBI, Cambridge, UK
Abstract in PDF format [68 KB] - Poster in PDF format [3,228 KB]
 
P17 Cobitis: A Computational Biology Tool Interoperability Scheme for easy Web services implementaion, integration and access
U. Pozzoli, M. Cavalleri, G. Memozzi and M. Sironi
Scientific Institute IRCCS "E. Medea", Bosisio Parini (LC), Italy
Abstract in PDF format [44 KB] - Poster in PDF format [2,144 KB]
 
P18 StrainInfo.net: Breaking down information barriers into holistic data integration scenarios using globally unique persistent identifiers
Peter Dawyndta,b, Bernard De Baetsb, Xianhua Zhouc, Juncai Mac, Jean Swingsa,d
aLaboratory of Microbiology, Ghent University, Belgium
bDepartment of Applied Mathematics, Biometrics and Process Control, Ghent University, Belgium
cInformation Network Center, Institute of Microbiology, Chinese Academy of Sciences, PR China
dBCCMTM/LMG Bacteria Collection, Ghent University, Belgium
Abstract in PDF format [132 KB] - Poster in PDF format [500 KB]

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