NETTAB 2012 Logo Como Lake NETTAB 2012 workshop focused on
Integrated Bio-Search
November 14-16, 2012, Como, Italy

NETTAB workshops are held under the patronage of
Bioinformatics Italian Society and EMBnet
Logo Politecnico di MilanoLogo IRCCS San Martino ISTSIB Swiss Institute of Bioinformatics

Como shoreline from the lake

List of oral communications

For exact allocation of talks in the scientififc sessions, see the Scientific Programme.

  • Rational design of organelle compartments in cells
    Claudio Angione, Giovanni Carapezza, Jole Costanza, Pietro Lio' and Giuseppe Nicosia
  • Filtering with alignment free distances for high throughput DNA reads assembly
    Maria Cristina De Cola, Giovanni Felici, Daniele Santoni and Emanuel Weitschek
  • A semantic collaborative system for the management of translational research projects
    Matteo Gabetta, Giuseppe Milani, Cristiana Larizza, Valentina Favalli, Eloisa Arbustini and Riccardo Bellazzi
  • Answering Gene Ontology terms to proteomics questions by supervised macro reading in Medline
    Julien Gobeill, Emilie Pasche, Douglas Teodoro, Anne-Lise Veuthey and Patrick Ruch
  • Using graph theory to analyze gene network coherence
    Francisco Gómez-Vela, Norberto Díaz-Díaz, Jose Antonio Lagares, Jose Antonio Sánchez and Jesús Aguilar-Ruiz
  • The open source ISA software suite and its international user community: knowledge management of experimental data
    Alejandra Gonzalez-Beltran, Eamonn Maguire, Philippe Rocca-Serra and Susanna-Assunta Sansone
  • Network-based gene-disease prioritization using PROPHNET
    Víctor Martínez, Carlos Cano and Armando Blanco
  • QTreds: a flexible LIMS for omics laboratories
    Piergiorgio Palla, Gianfranco Frau, Laura Vargiu and Patricia Rodriguez-Tomé
  • Development of a text search engine for medicinal chemistry patents
    Emilie Pasche, Julien Gobeill, Fatma Oezdemir-Zaech, Therese Vachon, Christian Lovis and Patrick Ruch
  • The ontogene system: an advanced information extraction application for biological literature
    Fabio Rinaldi
  • IntelliGenWiki: An Intelligent Semantic Wiki for Life Sciences
    Bahar Sateli, Marie-Jean Meurs, Gregory Butler, Justin Powlowski, Adrian Tsang and René Witte
  • ROCK: a resource for integrative breast cancer data analysis
    Marketa Zvelebil, Costas Mitsopoulos and Saif Ur-Rehman

These communications will be given at the technological-industrial session, see the Scientific Programme.

  • Extracting knowledge from biomedical data through Logic Learning Machines and Rulex
    Marco Muselli
  • Data modeling: the key to biological data integration
    François Rechenmann
  • GeneGrid: finding disease causing variants in NGS data
    Jochen Supper, Claudia Gugenmus, Korbinian Grote and Frederic Eyber

For exact allocation of talks in the scientififc sessions, see the Scientific Programme.

  • BioQuery-ASP: querying biomedical databases and ontologies using Answer Set Programming
    Esra Erdem and Umut Oztok
  • A strategy to reduce technical variability and bias in RNA sequencing data
    Francesca Finotello, Enrico Lavezzo, Luisa Barzon, Paolo Mazzon, Paolo Fontana, Stefano Toppo and Barbara Di Camillo
  • Applications of a generic model of genomic variations functional analysis
    Sarah N. Mapelli and Uberto Pozzoli
  • Ranking-aware integration and explorative search of distributed bio-data
    Marco Masseroli, Matteo Picozzi and Giorgio Ghisalberti
  • DiGSNP: a web tool for Disease-Gene-SNP hierarchical prioritization
    Carmen Navarro, Carlos Cano, Armando Blanco and Fernando García
  • The Biovel project: robust phylogenetic workflows running on the Grid
    Saverio Vicario, Bachir Balech, Giacinto Donvito, Pasquale Notarangelo and Graziano Pesole

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