Presentations

Here, all presentations from authors that agreed to have them published in the NETTAB site will be made available, grouped by session. Sessions will be listed cronologically.
All presentations are formatted as PDF files. You are kindly requested to make a personal use only, cite the source and the authors and do not redistribute, unless an explicit consensus from the authors is granted.
Not all presentations are currently linked, some of them will be added to the site later. Stay tuned!

Tutorials

• Data Warehouse
  Carlo Combi,
  Department of Computer Science, University of Verona, Verona, Italy Carlo Combi
• Bio Search Computing
  Marco Masseroli,
  Dipartimento di Elettronica e Informazione, Politecnico di Milano, Milan, Italy
• Medical Language Processing
  Pierre Zweigenbaum,
  LIMSI - CNRS, Orsay, France

Opening session

• Network Models of Mesophenotypes in Personal Genomics and Targeted Therapies
  Yves A. Lussier,
  Institute for Translational Medicine, University of Chicago, USA

Session 2

• Formal Modelling and Performance Analysis of Clinical Pathway
  Rui Han, Xian Yang, Rowe Anthony, and Yike Guo
• EVA: Exome Variation Analyzer, a convivial tool for filtering strategies
  Sophie Coutant, Arnaud Lefebvre, Martine Léonard, Elise Prieur-Gaston, Dominique Campion, Thierry Lecroq, and Hélène Dauchel
• Spell-checking queries by combining Levenshtein and Stoilos distances
  Zied Moalla, Lina F. Soualmia, Élise Prieur-Gaston, Thierry Lecroq, and Stéfan J. Darmoni
• An integrated annotation system to support whole exome sequencing experiments design and data management
  Ivan Limongelli, Angelo Nuzzo, Riccardo Bellazzi, Annalisa Vetro, Erika Della Mina, Roberto Ciccone, and Orsetta Zuffardi
• Bio Search Computing: Exploration and Global Ranking of Distributed BioMedical-Molecular Data
  Marco Masseroli, Giorgio Ghisalberti, and Stefano Ceri
• Drug Interaction Information Extraction from Text Using Conditional Random Fields
  Stefania Rubrichi and Silvana Quaglini

Session 3

• From Omics to Systems Biology - an Approach to Individualized Medicine
  Thomas Illig,
  Institute of Epidemiology, Helmholtz Zentrum München, Neuherberg, Germany

Session 4

• ICT Architectures for Biobanks to Support Clinical Research
  Jan-Eric Litton,
  Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden

Session 5

• Towards a wiki system for human and animal cell lines
  Dan Bolser and Paolo Romano
• Formal Analysis of Bone Clinical Pathologies
  Pietro Liò, Emanuela Merelli, and Nicola Paoletti
• Bag of Naïve Bayes: biomarker selection and classification from Genome-Wide SNP data
  Francesco Sambo, Emanuele Trifoglio, Barbara Di Camillo, Gianna Toffolo, and Claudio Cobelli
• Design of neural network models for screening anticancer activities in taxol analogues
  Stan Svojanovsky, Swapan Chakrabarti, Gunda Georg, and Peter Smith
• A novel method for proteomic analysis of immunoglobulin light chains and attribution to a germline gene-based family
  Alessandra Tiengo, Francesca Lavatelli, Nicola Barbarini, Giampaolo Merlini, and Paolo Magni
• MURCIA: Fast parallel solvent accessible surface area calculation on GPUs and application to drug discovery and molecular visualization
  Eduardo J. Cepas Quiñonero, Horacio Pérez-Sánchez, Wolfgang Wenzel, and José M. García

Special session

• Why clinicians need e-Health
  Terry Hannan,
  University of Tasmania, Launceston, Australia
• The Interoperability Journey
  Amnon Shabo,
  IBM Research Lab, Haifa, Israel

Session 6

• Computing our Patients' Future Using Data from our Healthcare Institutions
  Shawn Murphy,
  Harvard Medical School, Boston, USA

Session 7

• GePhCARD & BioMIMS: a combined platform that support research on hereditary diseases
  Marina Mordenti, Alexander Melament, Elena Pedrini, Valentina Filomena Gentile, Manuela Locatelli, Sergio D'Ascia, Giuseppe Frangiamone, Yardena Peres, and Luca Sangiorgi
• Ad2BioDB Open Source Bioinformatics Platform for High-Throughput Data Management
  Amitava Bhattacharyya, Andrea Calabria, Maurizio Mercurio, and Daniele Cusi
• A New Cross-Platform Multi-Signature Classifier Approach To Predict Neuroblastoma Patients Outcome
  Massimo Acquaviva, Andrea Cornero, Paolo Fardin, Fabiola Blengio, Maria Luisa Belli, and Luigi Varesio
• Spatial pharmacokinetic-toxicokinetic modelling
  Paola Lecca

Closing session

• State of Art of ONCO-i2b2
  Riccardo Bellazzi, University of Pavia, Italy
• Announcement of NETTAB 2012
  Marco Masseroli,
  Dipartimento di Elettronica e Informazione, Politecnico di Milano, Milan, Italy